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mitochondrial genome; buckwheat; plastid genome; genetic diversity; long reads; targeted assembly; genome assembly; Fagus; Fagaceae; Fagales; molecular marker; mitochondrial marker; taxon assignment; CAPS marker; SNP; next-generation sequencing; Solanum; Italian landraces; plastome; molecular markers; phylogenetic analysis; plastid transformation; sugarcane; unfurled leaves; streptomycin; heteroplasmy; mesophyll and bundle sheath cells; plastids; photomorphogenesis; retrograde control; biogenic signals; lincomycin; norflurazon; pap7-1 mutant; mitochondria; RNA processing; algal evolution; circular RNA; polycytidylation; PacBio Iso-Seq; Capparaceae; chloroplast genome; Cadaba; Maerua; phylogenetic relationships